Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863090.1_cds_XP_016515538.1_27874
CDS Infomation

[gene=LOC107832235] [db_xref=GeneID:107832235] [protein=fasciclin-like arabinogalactan protein 17] [protein_id=XP_016515538.1] [location=complement(join(11029..11090,13104..14406))] [gbkey=CDS]
Sequence

ATGGATTTTCAGATCTATGGCGTTAGCAATCTCTTCATCTTCACTGTTATACTCCTTTTC
TCCATTGCAACTGCCACATTGCAAGAAAACCCAACTGCAACATTTGCAAAACCCACAACT
TCGGCACCCCAAATCAACTCAAATTCCATTCTTGTAGCTCTTTTGGATTCTCACTACACT
GAGCTTTCTGAGCTAGTTGAAAAAGCCCTTTTGCTTCAAACACTTGAAGAAGCTGTTTCT
AAACACAACATTACCATTTTTGCCCCTAAAAATGAGGCTCTTGAACGTGATTTGGACCCT
GAGTTCAAGCGTTTCTTGCTTGAACCTGGGAATCTCAGGTCCTTACAAAATTTGTTGCTG
TTCCACATGATTCCCACTCGCATTGTTTCCAACCAATGGCCGGCGCGTGTGCACGCGACC
TTGTATCCTGGAGATGAGAATGTGAATGTTGTGGAGAAGAACGGTGAGAAAATGGTGAGC
AGTGCTATGATTATTAAGCAAGACGATATTATCAAACCCGACGGTGTAATTCATGGGATT
GAGCGCGTGTTGATACCCAAATCGGTTCAGCAAGATTTCAACACCCGAAGAAGTCTCCGG
TCAATCTCCGCCGTGCTGCCGGAAGGTGCACCGGAGGTTGACCCGAGAACTCACCGGTTG
AAGAAACCAGCACCTGTGCCAGCTGGCACACCACCGGTGCTGCCAGTGTACGATGCGCTA
GCGCCCGGGCCATCTCTGGCCCCGGCACCAGCTCCCGGTCCAGGTGGACCCCACCATCAC
TTTGATGGTGAAAGTCAAGTAAAAGATTTTATTCAAACACTCCTACATTATGGAGGTTAC
AATGAATTAGCAGACATTCTTGTGAATCTAACATCATTGGCTACAGAAATGGGTAAATTA
GTATCAGAAGGGTATGTTTTAACTGTTCTGGCGCCCAATGATGAAGCGATGGCTAAGCTG
ACGACTGATCAGCTTAGCGAACCCGGGGCGCCAGAACAGATAATGTATTACCATATAATA
CCGGAGTACCAAACGGAGGAGAGTATGTATAATGCAGTGAGGAGATTTGGGAAAGTGAAG
TATGATACATTGAGGTTACCACATAAAGTTGTGGCTGAAGAAGCTGATGGATCAGTGAAA
TTTGGGGCAGGTGAAGAAGGGGCATATTTGTTTGATCCTGATATTTATACTGATGGAAGG
ATCTCTGTACAAGGGGTTGATGGTGTTCTGTTTCCTATTGAGGAAATTAAGGTGGCTCCT
GTAGCTGCCCCTGTTGCTAAAGTTGTTGCAAAGCCAAGAAGAGGAAAGTTGATGGAAGTA
GTATGTGGTACATTGGGGTCATTTGCTTTTGCTAGTTGTCATTAA

Peptide Sequence

PEP ID

XP_016515538.1
PEP Infomation

PREDICTED: fasciclin-like arabinogalactan protein 17 [Nicotiana tabacum]
Sequence

MDFQIYGVSNLFIFTVILLFSIATATLQENPTATFAKPTTSAPQINSNSILVALLDSHYT
ELSELVEKALLLQTLEEAVSKHNITIFAPKNEALERDLDPEFKRFLLEPGNLRSLQNLLL
FHMIPTRIVSNQWPARVHATLYPGDENVNVVEKNGEKMVSSAMIIKQDDIIKPDGVIHGI
ERVLIPKSVQQDFNTRRSLRSISAVLPEGAPEVDPRTHRLKKPAPVPAGTPPVLPVYDAL
APGPSLAPAPAPGPGGPHHHFDGESQVKDFIQTLLHYGGYNELADILVNLTSLATEMGKL
VSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVRRFGKVK
YDTLRLPHKVVAEEADGSVKFGAGEEGAYLFDPDIYTDGRISVQGVDGVLFPIEEIKVAP
VAAPVAKVVAKPRRGKLMEVVCGTLGSFAFASCH

Transcript Sequence

Gene sequence data has not been registered.